Eye Color15q13.1

rs12913832 - The Primary Eye Color Gene

Gene: HERC2/OCA2

rs12913832 is the single most important genetic variant for eye color determination. Located in the HERC2 gene, it acts as a regulatory switch for the OCA2 gene, which controls melanin production in the iris.

Genotype Interpretations

AA~20% (Europeans)

Blue/green eyes - reduced OCA2 expression leads to less iris melanin

AG~35% (Europeans)

Green/hazel eyes - intermediate melanin production. Eye color may shift over lifetime

GG~45% (Europeans), ~99% (East Asian, African)

Brown eyes - full OCA2 expression, high iris melanin

Population Context

The A allele is almost exclusively found in European populations. The ancestral G allele (brown eyes) is near-fixed in African and East Asian populations.

Clinical Relevance

No direct clinical significance. Used in forensic DNA phenotyping (IrisPlex system) to predict eye color from crime scene DNA.

Sources

  • [1] Sturm RA et al. (2008) Am J Hum Genet 82:424-31
  • [2] Eiberg H et al. (2008) Hum Genet 123:177-87

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